Go for a Small Base die, if only to have it in your arsenal. You may not need it every time, but I can pretty well assure you, there are times when you WILL need one.
I ran into this exact problem this past weekend (at a match, naturally) with a batch of 308 cases that I DID F/L size. Even checked them on the gage to make sure H/S was right where I wanted it, and it was. The body diameter never crossed my mind, as I thought these cases were last fired in my Palma gun; the same one I was shooting at this match. First string, first sighter, I found myself fighting to get the round to chamber. It wouldn't. Once I got it extracted (no small feat, either) you could instantly see the scuff marks on the body, just ahead of the extractor groove. These cases WERE Full Length resized, but they it turned out to be some that had been fired in another of my 308 Match rifles, with a different 308 chamber than the Palma gun has. So there's other times they'll come in handy, and they're not just something to use if you're messing with mil-surplus MG fired brass. Sometimes even the good stuff can benefit from a little more squeeze.
I've been at this a while, and Murphy STILL has a way of finding me on the firing line from time to time.