ctimgo: Yes, the bullet will be pushed deeper into the case, but how much will also depend on the amount of neck tension/bullet pull. A soft seated bullet will seat deeper with less engraving, than one with a heavier pull. Using a neck bushing die gives the choice of how much tension is wanted between the case neck & the bullet.
On bullets with a lot of neck tension, the bullet will be more heavily engraved by the leade area of the throat.
I personnally do not like to "jam" my seated bullets, mainly because if there is ever a reason that the loaded round must be extracted, like a cartridge mis-fire or when the firing line must be made safe during a match, the bullet is sure to be left in the barrel when the case full of powder is pulled from the chamber.
I also agree with Bens' comments as "jamming" relates to accuracy. Some bullets in combination with the powder, primer, bullet jacket material, ogive number, leade angle, etc. etc. will be mediocre when touching or jumped (seated with freebore), but really come on strong with some degree of "jam". It's for you to decide which combination works best for you. Jamming can produce smaller groups, but I do not jam unless it's been proven to be beneficial to accuracy. JMO