Some trimmers index from the shoulder, meaning neck length should be very consistent. However, one may notice some overall case length variance when using this type of trimmer, even though neck length is very uniform. Using a trimmer that indexes from the base of the case can provide very consistent case overall length values, but one may find some variance in neck length when using a trimmer of this type, even though case overall length is very uniform. I've used both types and that is what I have noticed over the years. I cannot reliably state that either system provided better precision in my hands. If there was a difference, I could not shoot it. I don't find that too surprising as having +/-.001" or so variance in bullet bearing surface engagement in the case neck is likely a very small source of error, especially as compared to other larger potential sources of error in the reloading and shooting process.
There is no "perfect" system for trimming cases. We try to make them as consistent as possible using whatever system we have available to us. If minor case length variance caused via some specific trimmer system is worrisome, one can always pick out a few cases at either end of the case length range and test them side-by-side to determine whether they can really shoot the difference. Alternatively, one can just hit the easy button and save themselves some time and reloading components by following Bart's advice above, which is backed up by winning performance.