I hope this doesn't sound too harsh, but I think you need to take a step back and decide on what you're really trying to do. Are you trying to prove that one of your scopes is defective? Are you doing a seating test? Are you trying to decide if testing at 200 yards is better than at 100 yards? Are you testing cold bore accuracy for long range hunting? Frankly, reading this post, it seems to me you're producing confusing data while wearing out your barrel and wasting time and money.
I would suggest this. First of all, you need to get a reliable scope on your rifle and leave it on there, unless of course you're actually testing your scopes. Then you need to make reasonable testing plan. Shooting five shots and going home is NOT a productive day at the range. Make yourself some rounds for sighting/fouling/warming your barrel or buy some good factory ammo. Shoot a few of these to get your barrel warm/fouled and then move on to the actual testing.
If you have a reasonable charge weight already, then do some seating tests. I like to load 40 or 50 rounds so they're all long and set at my deepest Jam value. I take my Wilson seating die and arbor press to the range and shoot the first three, then I progressively seat a batch of three rounds shorter and shoot them based on a pre-determined plan which I have printed out to bring with me to the range. The idea is to test various jumps out to the maximum reasonable value using only three rounds per group. It is unlikely, but not impossible, that a bad three shot group will turn into a good five-shot group.
Then, I examine favorable three shot groups and seat five remaining rounds at that length and confirm the good looking group of three with an identical group of five. Depending on how much ammo remaining, I might explore 5 shot groups a bit longer and a bit shorter than whatever seating depth has revealed itself to be promising. By the time I run out of my 40 or 50 rounds, I normally have determined the best seating depth for that particular recipe and gun combination.
If you can't seat at the range, you can pre seat a batch of ammo at home and decide if you want to shoot batches of three, go home and make more ammo at the most favorable seating depth, and return to the range for confirmation. Or perhaps you want to make up a big batch of 5 shot groups at various seating depths. One requires two trips to the range and the other requires more ammo, some of which you know will be so-so or even bad.
All this is done at 100 yards very early in the morning in still air for obvious reasons. If you can truly compensate for the wind by adjusting your aim point during load work up testing, then you won't be posting on this forum because you will be too busy autographing World Champion posters with your picture on them. Testing at short range requires precision measurements so I scan my targets and use On Target software to measure the holes and accurately record data to the nearest .001".
On Target is cheap and easy to use. It outputs data that you can paste into a spread sheet for further study. Once you have digitized data it's a snap to use M.S. Excel in order to make a graph like this one.
It shows a seating test which shows that a jump of .010" is the clear winner. I plot the MOA, the ATC (the same as Mean Radius) and the Vertical Height of the five shot groups. This is dead simple if you use On Target software to measure the target. This test is further documented and detailed in my test log #632 which is a M.S. Word file with all the data I might need to duplicate this recipe. I also save the target measurements along with additional data for each group in case I want to go back and graph, for instance, the MOA vs MV or any other parameter.
Depending on my goal, this particular seating test might lead to doing some fine tuning tests of the seating depth between .005" jump and .015" jump. Or I might call .010" good and move on to fine tuning a charge weight test, a neck tension test, or a comparison test between two different kinds of primers.
The point is that you can't really decide where to go unless you first know where you are at the moment. The best path can usually be found by carefully gathering data and studying it carefully to learn what it's telling you. Then you can isolate a different parameter and test it based on your previous knowledge which should be a solid jumping off place, not for example some shaky batch of data gathered when you used a scope which you can't trust.